Computational Molecular Science and Engineering Forum | |||
| Session 627 - Computational Biology: Systems Modeling II | |||
| This session is devoted to new developments in the theoretical and computational studies of biological systems. Such systems include protein/DNA interactions, protein/protein interactions, genetic networks, metabolic pathways, signal transduction pathways and inter- or intra-cellular transport of biomolecules. Presentations will focus on theoretical and computational techniques to predict, engineer or analyze the kinetic and thermodynamic properties of these systems. Emphasis will be placed on techniques that enable engineering by connecting molecular-level to macroscopic system-level properties. Additional favored topics include: new biological insights from studies of systems and industrial applications of computationally-driven biological systems engineering. Validation through comparison with experimental results is strongly encouraged. | |||
| Chair: | Vassily Hatzimanikatis | ||
| CoChair: | David Klinke | ||
| CoSponsor(s): | Engineering Fundamentals in Life Science | ||
| 627a | Characterizing the Interval Timer within Drosophila's Circadian Clock Robert S. Kuczenski, Kevin C. Hong, Jordi García-Ojalvo, Kelvin H. Lee | ||
| 627b | Analyzing Individual Cancer Cell Motility with Chemotaxis Perspective Alka A. Potdar, Peter T. Cummings | ||
| 627c | A Combined Modeling and Experimental Approach for in Vivo Parameter Estimation Gregory T. Reeves, Stas Shvartsman | ||
| 627d | Characterization of Cross-Hybridization Via Stochastic Simulation Erdem Arslan, Ian J. Laurenzi | ||
| 627e | Improved Logical Formulation for Transcription Regulatory Networks Reconstruction Via Integer Linear Programming Joao Natali, Jose M. Pinto | ||
| 627f | Deterministic and Stochastic Modeling of Genetic Networks with Positive Feedback Architecture Michail Stamatakis, Nikos Mantzaris | ||
| 627g | Modeling Ire1p Regulation and Activation in the Yeast Upr Scott Hildebrandt, David Raden, Anne Skaja Robinson, Francis J. Doyle III | ||
| 627h | Adhesive Dynamics Simulations of the Shear Threshold Effect for Leukocytes Kelly E. Caputo, Daniel A. Hammer | ||
| 627i | Molecular Mechanisms of HIV-1 Latency: Stochastics in Gene Expression and Chromatin Regulation John C. Burnett, Adam P. Arkin, David V. Schaffer | ||
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